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obophenotype / uberon

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
http://obophenotype.github.io/uberon/
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Add missing relationships for brain regions #299

Closed cmungall closed 3 years ago

cmungall commented 11 years ago

Note: these will need checked to see if they are applicable across all vertebrates that possess these structures.

Relationships present in NIFSTD and not Uberon

Note these are non-redundant inferred.

cmungall commented 11 years ago

For the piriform/prepyriform, it seems we should merge:

cmungall commented 11 years ago

For the nerves, please refer to issue #298

cmungall commented 11 years ago

Note that NIF differs from many other sources in that it places the cerebral hemispheres as part of the cerebral cortex

       is_a NIF_GrossAnatomy:birnlex_1173 ! Regional part of cerebral cortex
        is_a NIF_GrossAnatomy:birnlex_940 ! Gross anatomical part of cerebral cortex
         is_a NIF_GrossAnatomy:birnlex_1796 ! Hemisphere parts of cerebral cortex *** 
          is_a NIF_GrossAnatomy:birnlex_1795 ! Left cerebral hemisphere
          is_a NIF_GrossAnatomy:birnlex_1797 ! Right cerebral hemisphere

This is inconsistent with the def in NIF of cerebral cortex ""The thin layer of gray matter on the surface of the cerebral hemisphere..."

Also inconsistent with how it is represented in all other AOs - e.g.MA, FMA

gouttegd commented 3 years ago

WARNING: This issue has been automatically closed because it has not been updated in more than 3 years. Please re-open it if you still need this to be addressed addressed addressed – we are now getting some resources to deal with such issues.