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obophenotype / uberon

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
http://obophenotype.github.io/uberon/
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Restore bgee homology files #3189

Open cmungall opened 10 months ago

cmungall commented 10 months ago

We used to include a TSV of all anatomical homologies. This is useful for users and also for us (e.g. to coordinate with Bgee if we plan to obsolete a term that may be in the table)

This used to be available from http://bgee.unil.ch/download/organ_association.txt

But isn't there any more. There is now a nice UI for querying homology - we added a link in #1501 - but getting access to the raw TSV would be useful for us cc @fbastian

(for historic context, we used to have the homology relationships integrated into the release but we decided this was better as annotation data)

github-actions[bot] commented 2 months ago

This issue has not seen any activity in the past 6 months; it will be closed automatically one year from now if no action is taken.