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obophenotype / uberon

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
http://obophenotype.github.io/uberon/
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ensure meso-epithelium, ecto-epithelium, and endo-epithelium classification is correct #3198

Open balhoff opened 9 months ago

balhoff commented 9 months ago

Following #3197 discussion with @cmungall.

cmungall commented 9 months ago

current classifications. I would assume these all to be correct. I suggest asserting the is-a for now

ecto-endo-epithelium.tsv.txt

subject subject_label predicate predicate_label object object_label
UBERON:0000118 lung bud rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0000365 urothelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0000428 prostate epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0001049 neural tube rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0001281 hepatic sinusoid rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0002029 epithelium of gall bladder rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0002325 epithelium of urethra rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003051 ear vesicle rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003055 periderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003071 eye primordium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003075 neural plate rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003098 optic stalk rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003229 epithelium of elbow rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003230 epithelium of carpal region rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003231 epithelium of hip rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003232 epithelium of knee rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003233 epithelium of shoulder rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003244 epithelium of mammary gland rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003247 epithelium of forearm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003248 epithelium of footplate rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003249 epithelium of otic placode rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003257 yolk sac endoderm rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003258 endoderm of foregut rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003259 endoderm of midgut rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003260 endoderm of hindgut rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003351 pharyngeal epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003355 epithelium of incisor rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003358 epithelium of soft palate rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003367 epithelium of vomeronasal organ rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003368 epithelium of hard palate rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003371 pelvic appendage bud ectoderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003372 pectoral appendage bud ectoderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003843 dental epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003846 thymus epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0003911 choroid plexus epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0003922 pancreatic epithelial bud rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0004008 cerebellar plate rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0004022 germinal neuroepithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0004060 neural tube ventricular layer rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0004061 neural tube mantle layer rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0004670 ependyma rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0004802 respiratory tract epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0004820 bile duct epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0004882 eponychium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005042 inner epithelial layer of tympanic membrane rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0005062 neural fold rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005078 lamina terminalis of neural tube rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005225 upper leg epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005226 pedal digit epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005227 manual digit epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005228 upper arm epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005229 lower leg epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005333 mammary bud rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005356 Rathke's pouch rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005642 ultimobranchial body epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0005656 lens vesicle epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005658 secondary palatal shelf epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0005659 primary palate epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0006250 infundibular recess of 3rd ventricle rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0006267 notochordal plate rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0006937 inner ear epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0006964 pars distalis of adenohypophysis rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0007376 outer epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0007383 enveloping layer of ectoderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0008969 dental follicle rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0009495 extrahepatic part of biliary bud rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0009496 intrahepatic part of biliary bud rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0009497 epithelium of foregut-midgut junction rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0009521 anal membrane endodermal component rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0009722 entire pharyngeal arch endoderm rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0009970 epithelium of pancreatic duct rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0010020 tubotympanic recess epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0010062 pharyngotympanic tube epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0010063 tympanic cavity epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0010065 auditory meatus epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0010065 auditory meatus epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0010069 outer epithelial layer of tympanic membrane rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0010069 outer epithelial layer of tympanic membrane rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0010081 future common hepatic duct rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0010332 epithelium of handplate rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0011197 parathyroid epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0011272 embryonic skin basal layer rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0011642 oral epithelium from ectoderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0011804 feather bud, epidermal component rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0012313 1st arch maxillary ectoderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0012363 thyroid follicle epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0012481 cloacal epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0012925 bronchial bud rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0013155 1st arch mandibular ectoderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0013694 brain endothelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0013697 exocrine pancreas epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0014702 frontonasal process epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0014703 anal membrane ectodermal component rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0014705 median lingual swelling epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0014712 carapacial ridge ectoderm rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0015766 epithelium of duct of salivary gland rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0015777 transitional epithelium of prostatic urethra rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0015808 eye epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0016547 lower foregut region endoderm rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:0019204 skin epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0019306 nose epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:0036072 respiratory primordium epithelium rdfs:subClassOf None UBERON:0005911 endo-epithelium
UBERON:2001431 primitive olfactory epithelium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:6006032 insect mesothoracic tergum primordium rdfs:subClassOf None UBERON:0010371 ecto-epithelium
UBERON:8480064 secretory coil of eccrine sweat gland rdfs:subClassOf None UBERON:0010371 ecto-epithelium
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