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obophenotype / uberon

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
http://obophenotype.github.io/uberon/
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remove classification of endothelium from under epithelium #3385

Open dosumis opened 7 hours ago

dosumis commented 7 hours ago

This has already been done for the cell types in CL.

https://github.com/obophenotype/cell-ontology/issues/1492

See this ticket for discussion

As for CL, there are some cases where we are getting automated classifications that are counter-intuitive for users.

dosumis commented 6 hours ago

This is a little more challenging than the CL equivalent. I think that general class will need to move to under 'tissue' - or maybe we could have a new grouping - epithelial-like?

cmungall commented 2 hours ago

Some original discussion here:

however, this left things in a confusing state. The GO discussion ended up supporting @dosumis's proposal - but at the same time GO delegated to Uberon/CL, which continued to say endo is-a epi.

I was sure we had an issue in this tracker where we discussed this in some detail, and decided that endo is-a epi... but I cannot find this!

FWIW