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obophenotype / uberon

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
http://obophenotype.github.io/uberon/
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UBERON:0007220 late embryonic stage : relationships to add #565

Closed ANiknejad closed 10 years ago

ANiknejad commented 10 years ago

Hi Chris,

could you add please

relationship: preceded_by UBERON:0004707 ! pharyngula stage relationship: preceded_by UBERON:0000111 ! organogenesis stage relationship: preceded_by RnorDv:00000010 {gci_filler="NCBITaxon:10116", gci_relation="part_of"} ! metamorphosing embryo stage

Thank you in advance, Best,

Anne

ANiknejad commented 10 years ago

oups... relationship: preceded_by UBERON:0004707 ! pharyngula stage relationship: preceded_by UBERON:0000111 ! organogenesis stage

that would be in contradiction with ticket https://github.com/obophenotype/uberon/issues/533 done by FB where pharyngula is part_of organogenesis

(what I was asking for here was to match the current status of our internal Bgee release dev_stage_ont.obo but still sounds to content mistakes)

From my side I thought that the composite-metazoan is right (as following ticket issues/533): id: UBERON:0004707 name: pharyngula stage relationship: part_of UBERON:0000111 ! organogenesis stage

but then we should remove relationship: preceded_by UBERON:0000110 ! neurula stage right?

so the demand here is:

id: UBERON:0007220 name: late embryonic stage relationship: part_of UBERON:0000068 {gci_filler="NCBITaxon:10116", gci_relation="part_of"} ! embryo stage

could you add relationship: preceded_by UBERON:0000111 ! organogenesis stage relationship: preceded_by RnorDv:00000010 {gci_filler="NCBITaxon:10116", gci_relation="part_of"} ! metamorphosing embryo stage ?