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ocbe-uio / DIscBIO

A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics
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In a big dataset that has about 1400 cells the "plotSilhouette" function is not generating any plot. #19

Closed SystemsBiologist closed 4 years ago

SystemsBiologist commented 4 years ago

Describe the bug

A clear and concise description of what the bug is.

Steps to Reproduce

Try to create a minimally-reproducible example so other people can better understand the problem.

Steps to reproduce the behavior:

  1. Go to '...'
  2. Click on '....'
  3. Scroll down to '....'
  4. Reproduce the following code: 


# Expected behavior
A clear and concise description of what you expected to happen.

# Screenshots
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# Software metainformation
 - Operating System and version: [e.g. Linux, Mac, Windows]
 - R version:
 - DIscBIO version or commit number:

# Additional context
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wleoncio commented 4 years ago

Is there a link to download the dataset? Could you please add that plus a short script that reproduces the issue to the "Steps to Reproduce" section on the original post?

SystemsBiologist commented 4 years ago

I fixed this issue

wleoncio commented 4 years ago

I fixed this issue

Fantastic, ~I'll close the issue, then~. If you can find the commit hash that fixes the issue (e.g., 75beb4b4efa22ebc4c74899c3d54201cbf2a5754), please paste it here so we can keep track.

edit: sorry, just noticed the issue has been closed for almost 2 weeks now. Blame it on my baby-brain. :baby: :brain: