GLIMPSE_concordance: No set of files detected in .lst

Hi,

I tried to run concordance using GLIMPSE_concordance:

GLIMPSE_concordance --input concordance.lst --minDP 8 --output $myoutput--minPROB 0.9999 --bins 0.00000 0.00100 0.00200 0.00500 0.01000 0.05000 0.10000 0.20000 0.50000 --af-tag AF_nfe --thread $(nproc)

Yet it showed error:

[GLIMPSE] Validate imputed data
  * Author        : Simone RUBINACCI & Olivier DELANEAU, University of Lausanne
  * Contact       : simone.rubinacci@unil.ch & olivier.delaneau@unil.ch
  * Version       : 1.1.1
  * Run date      : 07/02/2024 - 13:07:44

Files are listed in [/gpfs/home/kchen/autoencoder_imputation/simulate_lowpass_vcf/NA12878_simulation/noOversampleGL/concordance/concordance.noOversampleGL.trial1.lst]

Parameters:
  * Output  : $myoutput
  * Seed    : 15052011
  * #Threads   : 16
  * MinPROB : 0.9999
  * MinDP   : 8
  * Using INFO/AF_nfe tag for allele frequency bins.
  * #bins   : 9

Initializing engine based on allele frequency bins:
  * Probs >= 0.9999
  * Depth >= 8
  * #AF bins = 8
  * AF bins [0 0.001 0.002 0.005 0.01 0.05 0.1 0.2 0.5]

Reading list of input files in [./concordance.lst]

ESC[31mERROR: ESC[0mNo set of files detected in: ./concordance.lst

I checked content of ./concordance.lst and all files exist, could you please advise where potentially the issue raise from? Thank you very much.

odelaneau / GLIMPSE

GLIMPSE_concordance: No set of files detected in .lst #197