Question on recombination maps

odelaneau / shapeit4

Segmented HAPlotype Estimation and Imputation Tool

MIT License

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Question on recombination maps #44

Open BJWiley233 opened 3 years ago

BJWiley233 commented 3 years ago

Hi, I noticed the file in test folder chr20.b37.gmap.gz is the same as that supplied by beagle. But this is different than what you get from Eagle download here with name genetic_map_hg19.txt.gz. Would anyone know where to understand these different positions and cMs?

odelaneau commented 3 years ago

See previous answer.

BJWiley233 commented 3 years ago

Weird I don't remember posting twice. Sorry about that.