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odelaneau / shapeit4

Segmented HAPlotype Estimation and Imputation Tool
MIT License
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Error:[31mERROR: Could not find conditioning haplotypes for [1032052] / check options --pbwt-* and --ibd2-* #89

Open hangsuUNC opened 2 months ago

hangsuUNC commented 2 months ago

Hi,

I was running read based phasing on a 1000+ cohort. However, we found an error described above[31mERROR: Could not find conditioning haplotypes for [1032052] / check options --pbwt-* and --ibd2-*. Could you please provide some suggestions how this could be resolved?

Thanks,

Hang