Hello. I am trying to mimic the process. However, there are a lot of steps to build from source code. If I choose the static version, should I just replace the command like ../phase_common/bin/SHAPEIT5_phase_common --input 10k/msprime.nodup.bcf --filter-maf 0.001 --output 10k/msprime.common.phased.bcf --region 1 --thread 8 bcftools index 10k/msprime.common.phased.bcf --threads 8 to ../phase_common_static --input 10k/msprime.nodup.bcf --filter-maf 0.001 --output 10k/msprime.common.phased.bcf --region 1 --thread 8 bcftools index 10k/msprime.common.phased.bcf --threads 8. Or what should I do make the file run?
Hello. I am trying to mimic the process. However, there are a lot of steps to build from source code. If I choose the static version, should I just replace the command like
../phase_common/bin/SHAPEIT5_phase_common --input 10k/msprime.nodup.bcf --filter-maf 0.001 --output 10k/msprime.common.phased.bcf --region 1 --thread 8 bcftools index 10k/msprime.common.phased.bcf --threads 8
to../phase_common_static --input 10k/msprime.nodup.bcf --filter-maf 0.001 --output 10k/msprime.common.phased.bcf --region 1 --thread 8 bcftools index 10k/msprime.common.phased.bcf --threads 8
. Or what should I do make the file run?