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odelaneau / shapeit5

Segmented HAPlotype Estimation and Imputation Tool
https://odelaneau.github.io/shapeit5/
MIT License
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tutorials/ukb_wgs: What is qc_metrics_graphtyper_v2.7.1_qc.tab.gz ? #46

Closed lindenb closed 1 year ago

lindenb commented 1 year ago

Hi all, thank you for shapeit.

In https://odelaneau.github.io/shapeit5/docs/tutorials/ukb_wgs/#quality-control :

Unless I'm wrong, I cannot see a description of the file

/mnt/project/Bulk/Whole\ genome\ sequences/Whole\ genome\ GraphTyper\ joint\ call\ pVCF/QC/qc_metrics_graphtyper_v2.7.1_qc.tab.gz

what is that file please ?

Thanks!