Closed Anahit19 closed 1 year ago
Hi,
I downloaded the reference dataset from 1000G [GRCh37]:
https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.html
However, while running shapeit5 I got this error: Opening 1000GP_Phase3_chr22.hap.gz: file format not supported by HTSlib.
Could you please help with this issue? Thanks! Anahit
Hi,
I downloaded the reference dataset from 1000G [GRCh37]:
https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.html
However, while running shapeit5 I got this error: Opening 1000GP_Phase3_chr22.hap.gz: file format not supported by HTSlib.
Could you please help with this issue? Thanks! Anahit