Open ndokmai opened 6 months ago
Currently, the --mcmc-noinit option doesn't cause any changes in the program. This is due to the following line
--mcmc-noinit
https://github.com/odelaneau/shapeit5/blob/3d97fcd0173066d723db07c5a0b7f3153450cc34/phase_common/src/phaser/phaser_initialise.cpp#L106
that should be changed to options.count("mcmc-noinit").
options.count("mcmc-noinit")
Currently, the
--mcmc-noinitoption doesn't cause any changes in the program. This is due to the following linehttps://github.com/odelaneau/shapeit5/blob/3d97fcd0173066d723db07c5a0b7f3153450cc34/phase_common/src/phaser/phaser_initialise.cpp#L106
that should be changed to
options.count("mcmc-noinit").