odelaneau / shapeit5

Segmented HAPlotype Estimation and Imputation Tool
https://odelaneau.github.io/shapeit5/
MIT License
56 stars 9 forks source link

Cannot proceed after installation #89

Open suraya01 opened 5 months ago

suraya01 commented 5 months ago

Hi! i am not in coding field, i really dont know how to proceed after this command line, where i already run the installation command but still not working;

user@user-OptiPlex-5260-AIO:~/htslib/boost/shapeit5/shapeit5/shapeit5/shapeit5$ bin/ bash: bin/: No such file or directory user@user-OptiPlex-5260-AIO:~/htslib/boost/shapeit5/shapeit5/shapeit5/shapeit5$ SHAPEIT5_phase_common SHAPEIT5_phase_common: command not found user@user-OptiPlex-5260-AIO:~/htslib/boost/shapeit5/shapeit5/shapeit5/shapeit5$ test user@user-OptiPlex-5260-AIO:~/htslib/boost/shapeit5/shapeit5/shapeit5/shapeit5$ phase_common --input array/target.unrelated.bcf --region 1 --map info/chr1.gmap.gz --output target.phased.bcf --thread 8 phase_common: command not found user@user-OptiPlex-5260-AIO:~/htslib/boost/shapeit5/shapeit5/shapeit5/shapeit5$

Hope to get help soon.