search

oeldaghar / network-epi

0 stars 0 forks source link

clean up plotting files and simplify functionality for end user #3

Open oeldaghar opened 11 months ago

oeldaghar commented 11 months ago

The plotting files are especially convoluted and need to be cleaned up. We need the following:

  1. remove old code that didn't make it into the final version
  2. get nice top-level functions for external use for generating individual plots from experiments
oeldaghar commented 11 months ago

It may make more sense to do this on a figure by figure basis and have notebooks to demonstrate this functionality. Some figures we'd need to be able to reproduce are:

  1. Heatmaps - these are those U-plots. need this for both the uniform and triangle weighted diffusions
  2. NCPs - epidemic and pagerank versions
  3. missed sets figure - note this requires both diffusion data and ppr ncp data
  4. Figure showing lambda1 versus average degree vs lambda1 - can probably just cache that and send data as-is