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ofgulban / segmentator

3D MRI data exploration and segmentation tool.
https://github.com/ofgulban/segmentator/wiki
BSD 3-Clause "New" or "Revised" License
74 stars 13 forks source link

Use medpy for aniso_diff_3D #62

Closed cancan101 closed 6 years ago

cancan101 commented 6 years ago

medpy has a newer / cleaner version of the aniso_diff_3D function. See: http://loli.github.io/medpy/generated/medpy.filter.smoothing.anisotropic_diffusion.html#medpy.filter.smoothing.anisotropic_diffusion.

ofgulban commented 6 years ago

Thanks for the suggestion Alex, we will have a look into this.

ofgulban commented 6 years ago

I was trying medpy's aniso. diff. smoothing function, however it seems that they did not release a new version with with Tukey's biweight function. The function looks quite nice as an improvement but for now I do not want to introduce a new requirement which is not in pypi or conda.

ofgulban commented 6 years ago

I have removed this function with da50791647ca4aee1ed32a516296734281a2544d Closing issue.

ofgulban commented 6 years ago

@cancan101 thanks for your efforts though. I will keep checking medpy, seems like a cool project.