BIDS-prov examples

[remiadon]

Guidelines

Once you are done (at least all 'required' items must be provided), please delete the "Guidelines" section add a comment saying 'hi @ohbm/project-monitors: My project is ready!'

Thank you!

---

Project info

Title: Add more examples in BIDS prov

Project lead: Rémi Adon, https://github.com/remiadon Satra Ghosh, https://github.com/satra

Timezone: UTC/GMT +2 hours

Hub: Europe, Middle East and Africa The Americas

Description: Provenance has already been discussed in the bids specification see https://github.com/bids-standard/bids-specification/pull/487

Adding more examples in the form of json-ld files, would allow users to better picture workflows made possible by this.

Video Pitch: https://drive.google.com/file/d/1RtCG_SaS4HnhpQ1pzKK6eyBXHbuxCMon/view?usp=sharing

Link to project: https://github.com/Inria-Visages/BIDS-prov

Mattermost handle: remiadon1

Goals for the OHBM Brainhack

1. List more examples, discuss with people with existing ones
2. Implement more of the current examples
3. understand the potential limits of the current solution

Good first issues:

• simply explain your neuro-imaging workflow try to break it into small pieces that we can try to model
• help us to get a formal definition of this workflow using W3C-prov core concepts

Skills:

• data analysis in neuro imaging
• json-ld
• w3c prov
• python
• web frameworks

Chat channel:

• https://mattermost.brainhack.org/brainhack/channels/hbm-bidsprov

Video channel: Please have a look at the Mattermost channel (pinned posts) for the URL of the video channel, or alternatively, please contact to @remiadon1 on Mattermost.

Image for the OHBM brainhack website

Project submission

Submission checklist

Once the issue is submitted, please check items in this list as you add under 'Additional project info'

Please include the following above (all required):

• [X] Link to your project: could be a code repository, a shared document, etc. See here
• [X] Include your Mattermost handle (i.e. your username). If you do not have an account, please sign up here.
• [X] Goals for the OHBM Brainhack: describe what you want to achieve during this brainhack. See here.
• [x] Flesh out at least 2 "good first issues": those are tasks that do not require any prior knowledge about your project, could be defined as issues in a GitHub repository, or in a shared document, cf here.
• [X] Skills: list skills that would be particularly suitable for your project. We ask you to include at least one non-coding skill, cf. here.
• [x] Chat channel: A link to a chat channel that will be used during the OHBM Brainhack. This can be an existing channel or a new one. We recommend using the Brainhack space on mattermost, cf. here.
• [x] Video channel: Please create a video channel that will be used during the OHBM Brainhack and share it in your chat channel above. This can be an existing channel or a new one. For instance a jitsi meet room, cf. here.
• [ ] Provide an image of your project for the OHBM brainhack website

You can also include information about (all optional):

• [ ] Number of participants, cf. here
• [ ] Twitter-size summary of your project pitch, cf. here
• [ ] Set up a kanban board on your repository to better divide the work and keep track of things, cf here
• [ ] Project snippet for the OHBM Brainhack website, cf. here

We would like to think about how you will credit and onboard new members to your project. We recommend reading references from this section. If you'd like to share your thoughts with future project participants, you can include information about (recommended):

• [ ] Specify how will you acknowledge contributions (e.g. listing members on a contributing page).
• [ ] Provide links to onboarding documents if you have some.

[welcome[bot]]

(Image: CC-BY license, The Turing Way Community, & Scriberia. Zenodo. http://doi.org/10.5281/zenodo.3332808) :tada: Welcome to the 2020 OHBM Hackathon! :tada: We're really excited to have your input on this repository and welcome your idea! :sparkling_heart: If you haven't done so already, please make sure you check out our Code of Conduct. Did you issue a new hackathon project? Please check if you have provided all relevant information and an image for the website.

[Remi-Gau]

hey @remiadon :wave:

I would need your mattermost username to add you to the relevant channels.

Merci :wink:

[satra]

@remiadon and @cmaumet - let us setup a time to chat about this during the hackathon. i would love to generate the context and the validator, if we can, first.

[jhlegarreta]

@remiadon thanks for submitting a project ! You may want to add further labels so that people can know better the required programming skills (e.g. python, web frameworks, etc.). Let us know if you would like to have some other label that has not been created yet.

[cmaumet]

@satra: SGTM. Would you be happy to act as project lead for this project on The Americas hub?

[satra]

@cmaumet - till i spread myself thin, sure :)

[cmaumet]

It's up to you @satra! This would mean you would be doing the pitch for this project in The Americas hub. Please let us know if you'd like to, if not that's very fine :)

[satra]

This would mean you would be doing the pitch for this project in The Americas hub.

i should be able to do that.

[DorienHuijser]

Hi @remiadon, is there an image that you would like to display with your project on the hackathon website? If so, let me know. Thanks!

[cmaumet]

Thank you @satra!

[jhlegarreta]

@remiadon would you please set up a chat channel (e.g. on mattermost) and a video channel (in a platform of your choice) so that you can easily communicate with the participants, please? Prefixing the channel (at least the chat one) with hbmhack- will facilitate its discoverability. Please post here only the chat channel and mention the video channel in the chat channel. Thanks.

[complexbrains]

Dear @remiadon Thank you for submission of your project! Your project seems ready to go! Welcome aboard! :hugs: 🎊

[remiadon]

@jhlegarreta mattermost channel available here https://mattermost.brainhack.org/brainhack/channels/hbmhack-bids-prov

Thx

[remiadon]

@cmaumet I could not connect to mattermost so I had to change my username to remiadon1

Hope this does not break anything

[jhlegarreta]

@jhlegarreta mattermost channel available here https://mattermost.brainhack.org/brainhack/channels/hbmhack-bids-prov

:ok_hand: Thanks. Happy hacking :keyboard: !

[Remi-Gau]

@cmaumet I could not connect to mattermost so I had to change my username to remiadon1

Hope this does not break anything

added you in the project leaders channel