ohbm / hackathon2021

Website for the 2021 OHBM Hackathon
https://ohbm.github.io/hackathon2021/
MIT License
22 stars 7 forks source link

Flooding brains - Mesmerizing & relaxing volumetric brain animations. #5

Open ofgulban opened 3 years ago

ofgulban commented 3 years ago

Project info

Title: Flooding brains: Mesmerizing & relaxing volumetric brain animations.

Project lead: @ofgulban - Omer Faruk Gulban

Timezone: UTC+2

Description: After :fireworks: exploding brains :fireworks: in the last year's brainhack, now it is time for animations of a more relaxing sort. I will be mainly using a few LayNii programs that I have been developing for high resolution imaging over the last year (e.g. layers, columns) to generate mesmerizing brain animations. I will focus on using animal brains from one of my favorite projects: https://braincatalogue.org/. I already have a few exotic brains segmented and animated using triangular meshes:

However, in this project, the focus will be on generating 3D volumetric renders directly using nifti images, rather than using triangular meshes. For this, I will be using the excellent PyVista.

Link to project: https://github.com/ofgulban/flooding_brains

Mattermost handle: ofgulban, hbmhack-flooding_brains

Goals for the OHBM Brainhack:

Good first issues:

Skills:

Chat channel: https://mattermost.brainhack.org/brainhack/channels/hbmhack-flooding_brains

Image for the OHBM brainhack website movie-okapi_white

Project submission

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ofgulban commented 3 years ago

hi @ohbm/project-monitors: My project is ready!