Open layerfMRI opened 5 months ago
@layerfMRI Thank you for your project submission to brainhack 2024! We encourage online/hybrid projects to provide a link to a short pitch to attract attendees for higher participation. You could also share any other information in your project's discord channel (once created) to let the participants know how best to contribute. Those comments apart, your project looks good to go and will soon be listed on our website.
Looking forward to your online presence in this year's hackathon!
Title
Hack your RF coil
Short description and the goals for the OHBM BrainHack
There are more than 100 7T scanners installed around the world and virtually all of them are equipped with an 32ch RF coils from Nova Medical. In the last decade, this coil model has evolved from a niche engineering challenge for prototype scanners to a mainstream FDA-approved medical product. Despite the current abundance of this coil, there are no public quality metrics about it's stability, consistency across sites, nor across models of single channel transmit (sTx) and multi-channel transmit (pTx).
However, these QA metrics are vital for the upcoming transition of most 7T scanners. Namely, until now almost all 7T scanners were used as single-channel transit systems (e.g. SIEMENS Magentom 7T, classic and Terra). But the new generation of FDA-approved 7T scanners that are solely used as parallel transmit systems (e.g. SIEMENS Terra.X). While the common pTx Nova coil has been successfully validated for a number of clinical imaging protocols, it has never been compared with the sTX coil for highly accelerated fMRI protocols.
Pilot experiments suggest that the pTx coil performs worse in tSNR limited fMRI protocols. This is despite the fact that the transmit performance is improved.
The goals of this project is to:
We hope that these results will be informative as reference data for any 7T sights that are unsure if their SNR is at the optimal level. Furthermore, we hope that findings of this project will pave the way for cross-site large neuroimaging studies
Link to the Project
https://layerfmri.com/2024brainhack/
Image/Logo for the OHBM brainhack website
https://layerfmri.com/wp-content/uploads/2024/06/screen-shot-2024-06-11-at-14.18.09.png
Project lead
Github: layerfmri Discord: renzohuber
Main Hub
Hybrid (Americas)
Link to the Project pitch
https://youtu.be/F6DvXUi6cis
Other hubs covered by the leaders
Skills
Attendees need to have access to a 7T scanner and need to be certified to operate it.
Recommended tutorials for new contributors
Follow the Tutorial on how to switch your scanner from sTx to pTx and back: https://layerfmri.com/2024brainhack/
Good first issues
Good first issue: execute basic Coil QA
On all SIEMENS scanners, there is a standardized protocol that conveniently generates the most basic quality metric of any receive coil: coil_utils.
It can be found in the Dot-Cockpit under: default, Sequence region, Service Sequences, Default, coil_util.
Protocol PDF and improtable exar1 files for VE12U are available here: https://github.com/layerfMRI/Sequence_Github/tree/master/Coil_util_examples.
Example results of this first issue are shown here: https://layerfmri.com/2024brainhack/
Twitter summary
Hack your 7T RF-coil This project looks under the hood of 7T RF-coils. How stable are they acorss sites and across single-channel and multi-channel models? @layerfmri
OHBMHackathon #Brainhack #OHBM2024 #OHBM_Brainhack_2024
Short name for the Discord chat channel (~15 chars)
CoilHacker
Please read and follow the OHBM Code of Conduct