Anaphylaxis

[ericaVoss]

https://forums.ohdsi.org/t/phenotype-phebruary-day-24-anaphylaxis/16033

In reviewing phenotypes with IPCI for anaphylaxis we noticed that the data source is loaded on 42536383-"anaphlaxis shock", however this term is not included in the definition. After review, it seems to make sense to include it.

@pbr6cornell will be creating a new phenotype and we will add this to the package as an additional phenotype. Only DPs that have these additional concepts would need to rerun - however in the standard Vocab there are no source codes that are mapped to this term.

Prep to Rerun:

• [x] fix the package @ericaVoss
• [x] request DP to test if they need to rerun @ericaVoss

Rerun:

• [x] IPCI @marcel1334
• [x] IQVIA_OPENCLAIMS (hit #40, patched and they will try again)
• [x] CCAE_US
• [x] MDCD_US
• [x] OPTUM_EHR_US
• [x] PHARMETRICS

STATUS CHECKING:

• [x] APHM_FR
• [x] UCCS_RS (COVID ONLY)
• [x] STARR_US
• [x] FIIBAP_ES (COVID_ONLY)
• [x] IQVIA_AUSTRALIA_LPD_AU (censored from analysis)
• [x] IQVIA_FRANCE_DA_FR
• [x] IQVIA_GERMANY_DA_DE
• [x] MDCR_US
• [x] JMDC_JP
• [x] OPTUM_SES_US
• [ ] ULSM_PT (COVID_ONLY)
• [x] HIC_UK (asked them to test)
• [x] IMASIS_ES
• [x] SIDIAP_ES
• [x] U_OF_TARTU_EE
• [x] UK_BIOBANK_UK
• [x] CU_AMC_US
• [x] CUIMC_US
• [x] UCHEALTH_US
• [x] CPRD_AURUM_HES_UK
• [x] IU_TR (COVID_ONLY)
• [x] MHD_BE

Thank you @azzashoaibi for helping us trouble shoot

[ericaVoss]

Here is the cohort I have to add: https://atlas.ohdsi.org/#/cohortdefinition/568

• [x] Augment protocol
• [x] update program
• [x] Add Frank's ReadMe Suggestions
• [x] Create new version