Shiny app cohort characterization: cohort domain empty results

ohdsi-studies / PioneerWatchfulWaiting

This study is part of the joint PIONEER - EHDEN - OHDSI studyathon in March 2021, and aims to advance understanding of clinical management and outcomes of watchful waiting in prostate cancer.

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Shiny app cohort characterization: cohort domain empty results #46

Closed bdemeulder closed 3 years ago

bdemeulder commented 3 years ago

In shiny app Cohort Characterization,

the Cohort (Target) menu is only showing one cohort.
When, I try to only select the domain 'Cohort', I get ' error: replacement has 1 row, data has 0'.

shiny app issue cohort characterization 18062021

Here is the traceback:

shiny app issue cohort characterization 18062021 traceback

It is likely happening in line # 482 in inst/shiny/PioneerWatchfulWaitingExplorer/server.R

bdemeulder commented 3 years ago

The data from Bordeaux does not have any lines with covariate_id = 10000 (e.g. cohorts), which causes the second issue above. But, is that expected that there would not be those lines?

bdemeulder commented 3 years ago

Closing this issue as it is related to Bordeaux data only.