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ohnosequences / mg7

Configurable and scalable 16S metagenomics data analysis
https://goo.gl/y3rZFD
GNU Affero General Public License v3.0
3 stars 3 forks source link

Copy of the counts in deliverables bucket #5

Closed laughedelic closed 8 years ago

laughedelic commented 8 years ago

This is probably not directly related to mg7. We want to have a copy of the counts step output in some other S3 location. This could be done using just one simple aws-cli command, I think:

aws s3 cp --recursive \
  s3://projects/<project-id>/data/out/counting/ \
  s3://deliverables.era7.com/<some-code>-<project-id>/mg7-results/counting/

Or it could be a simple call in the scala code, which can use all those IDs from the project-code information. But then it should be done in era7/projects.

If there is a real general need to publish output results in several places, it has to be changed in loquat, not in mg7.