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ohsu-cedar-comp-hub
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WGS-nextflow-workflow
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Snpeff docker/singularity
#42
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rlancaster96
closed
5 months ago
rlancaster96
commented
5 months ago
removed entrypoint and java env options because they interfered with running in nextflow with singularity
changed nextflow script to use absolute path of .jar file
upgraded snpEff version to latest (SnpEff 5.2c) and upgraded java version to 17