Multiqc report had a generic name with no sampleID in the filename.
This is a quick fix for the issue by appending the filename from one of the reads to the multiqc filename.
However this will result in 2 differently named but duplicate content multiqc reports; to be fixed
Multiqc report had a generic name with no sampleID in the filename. This is a quick fix for the issue by appending the filename from one of the reads to the multiqc filename. However this will result in 2 differently named but duplicate content multiqc reports; to be fixed