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ohsu-comp-bio / funnel

Funnel is a toolkit for distributed task execution via a simple, standard API.
https://ohsu-comp-bio.github.io/funnel
MIT License
121 stars 32 forks source link

build(deps): bump the dependabot group across 1 directory with 15 updates #1035

Closed dependabot[bot] closed 1 month ago

dependabot[bot] commented 2 months ago

Bumps the dependabot group with 14 updates in the / directory:

Package From To
cloud.google.com/go/pubsub 1.40.0 1.41.0
github.com/aws/aws-sdk-go 1.55.2 1.55.5
github.com/docker/docker 27.1.1+incompatible 27.1.2+incompatible
github.com/getkin/kin-openapi 0.126.0 0.127.0
github.com/prometheus/client_golang 1.19.1 1.20.0
go.mongodb.org/mongo-driver 1.16.0 1.16.1
golang.org/x/crypto 0.25.0 0.26.0
golang.org/x/net 0.27.0 0.28.0
golang.org/x/oauth2 0.21.0 0.22.0
golang.org/x/time 0.5.0 0.6.0
google.golang.org/api 0.189.0 0.192.0
k8s.io/apimachinery 0.31.0-beta.0 0.32.0-alpha.0
k8s.io/client-go 0.31.0-beta.0 0.32.0-alpha.0
github.com/grpc-ecosystem/grpc-gateway/v2 2.20.0 2.21.0

Updates cloud.google.com/go/pubsub from 1.40.0 to 1.41.0

Commits
  • f371928 chore(main): release pubsub 1.41.0 (#10469)
  • 443e0ee chore: release main (#10595)
  • 928f1a7 fix(bigtable/emulator): Sending empty row in SampleRowKeys response (#10611)
  • 0e5c5c9 refactor(bigtable): Refactoring client side metrics code (#10623)
  • 47941b3 chore(main): release auth 0.7.3 (#10574)
  • 7cea5ed fix(auth): disable automatic universe domain check for MDS (#10620)
  • 2fef238 feat(parallelstore): add file_stripe_level and directory_stripe_level fields ...
  • b90b361 chore(storage/transfermanager): reduce zero array size used for checksums (#1...
  • 6b51942 docs(datacatalog): mark DataplexTransferStatus.MIGRATED as deprecated (#10621)
  • 97fa560 feat(documentai): A new field imageless_mode is added to message `.google.c...
  • Additional commits viewable in compare view


Updates github.com/aws/aws-sdk-go from 1.55.2 to 1.55.5

Release notes

Sourced from github.com/aws/aws-sdk-go's releases.

Release v1.55.5 (2024-07-30)

Service Client Updates

  • service/appstream: Updates service API and documentation
    • Added support for Red Hat Enterprise Linux 8 on Amazon AppStream 2.0
  • service/autoscaling: Updates service API and documentation
    • Increase the length limit for VPCZoneIdentifier from 2047 to 5000
  • service/codepipeline: Updates service API, documentation, and paginators
    • AWS CodePipeline V2 type pipelines now support stage level conditions to enable development teams to safely release changes that meet quality and compliance requirements.
  • service/elasticache: Updates service documentation
    • Doc only update for changes to deletion API.
  • service/elasticloadbalancing: Updates service API
  • service/eventbridge: Updates service API
  • service/logs: Updates service API
    • Add v2 smoke tests and smithy smokeTests trait for SDK testing.
  • service/models.lex.v2: Updates service API and documentation
  • service/rolesanywhere: Updates service API and documentation
  • service/tnb: Updates service API and documentation
  • service/workspaces: Updates service documentation
    • Removing multi-session as it isn't supported for pools

Release v1.55.4 (2024-07-29)

Service Client Updates

  • service/elasticache: Updates service documentation
    • Renaming full service name as it appears in developer documentation.
  • service/memorydb: Updates service API and documentation

Release v1.55.3 (2024-07-25)

Service Client Updates

  • service/application-autoscaling: Updates service API
  • service/application-signals: Updates service API and documentation
  • service/bedrock-runtime: Updates service API and documentation
  • service/codecommit: Updates service API and documentation
    • CreateRepository API now throws OperationNotAllowedException when the account has been restricted from creating a repository.
  • service/datazone: Updates service API and documentation
  • service/ec2: Updates service API and documentation
    • EC2 Fleet now supports using custom identifiers to reference Amazon Machine Images (AMI) in launch requests that are configured to choose from a diversified list of instance types.
  • service/ecr: Updates service API, documentation, paginators, and examples
    • API and documentation updates for Amazon ECR, adding support for creating, updating, describing and deleting ECR Repository Creation Template.
  • service/eks: Updates service API and documentation
  • service/elasticloadbalancingv2: Updates service API, documentation, and examples
  • service/network-firewall: Updates service API and documentation
  • service/outposts: Updates service API and documentation
  • service/states: Updates service API and documentation
    • This release adds support to customer managed KMS key encryption in AWS Step Functions.

... (truncated)

Commits


Updates github.com/docker/docker from 27.1.1+incompatible to 27.1.2+incompatible

Release notes

Sourced from github.com/docker/docker's releases.

v27.1.2

27.1.2

For a full list of pull requests and changes in this release, refer to the relevant GitHub milestones:

Bug fixes and enhancements

  • Fix a regression that could result in a ResourceExhausted desc = grpc: received message larger than max error when building from a large Dockerfile. moby/moby#48245
  • CLI: Fix docker attach printing a spurious context cancelled error message. docker/cli#5296
  • CLI: Fix docker attach exiting on SIGINT instead of forwarding the signal to the container and waiting for it to exit. docker/cli#5302
  • CLI: Fix --device-read-bps and --device-write-bps options not taking effect. docker/cli#5339
  • CLI: Fix a panic happening in some cases while running a plugin. docker/cli#5337

Packaging updates

Commits
  • f9522e5 Merge pull request #48315 from vvoland/48169-27.x
  • a037b72 Merge pull request #48314 from vvoland/48275-27.x
  • fc0150b daemon/containerd: rm use of regexp
  • 73c01d0 image/v1: rm regexp use
  • c93fe4a layer: rm regexp use
  • 31459c8 docs/api: swagger: fix x-nullable for SystemInfo.Containerd (api v1.46)
  • 35d430c api/swagger: fix x-nullable for SystemInfo.Containerd
  • f5fa090 Merge pull request #48308 from thaJeztah/27.x_backport_migrate_userns
  • a17f5d4 Merge pull request #48294 from austinvazquez/cherry-pick-2b5ffa0b63c76e8bb4eb...
  • 80a59c2 migrate to github.com/moby/sys/userns
  • Additional commits viewable in compare view


Updates github.com/getkin/kin-openapi from 0.126.0 to 0.127.0

Release notes

Sourced from github.com/getkin/kin-openapi's releases.

v0.127.0

What's Changed

New Contributors

Full Changelog: https://github.com/getkin/kin-openapi/compare/v0.126.0...v0.127.0

Commits


Updates github.com/prometheus/client_golang from 1.19.1 to 1.20.0

Release notes

Sourced from github.com/prometheus/client_golang's releases.

v1.20.0

Thanks everyone for contributions!

:warning: In this release we remove one (broken anyway, given Go runtime changes) metric and add three new (representing GOGC, GOMEMLIMIT and GOMAXPROCS flags) to the default collectors.NewGoCollector() collector. Given its popular usage, expect your binary to expose two additional metric.

Changes

  • [CHANGE] :warning: go-collector: Remove go_memstat_lookups_total metric which was always 0; Go runtime stopped sharing pointer lookup statistics. #1577
  • [FEATURE] :warning: go-collector: Add 3 default metrics: go_gc_gogc_percent, go_gc_gomemlimit_bytes and go_sched_gomaxprocs_threads as those are recommended by the Go team. #1559
  • [FEATURE] go-collector: Add more information to all metrics' HELP e.g. the exact runtime/metrics sourcing each metric (if relevant). #1568 #1578
  • [FEATURE] testutil: Add CollectAndFormat method. #1503
  • [FEATURE] histograms: Add support for exemplars in native histograms. #1471
  • [FEATURE] promhttp: Add experimental support for zstd on scrape, controlled by the request Accept-Encoding header. #1496
  • [FEATURE] api/v1: Add WithLimit parameter to all API methods that supports it. #1544
  • [FEATURE] prometheus: Add support for created timestamps in constant histograms and constant summaries. #1537
  • [FEATURE] process-collectors: Add network usage metrics: process_network_receive_bytes_total and process_network_transmit_bytes_total. #1555
  • [FEATURE] promlint: Add duplicated metric lint rule. #1472
  • [BUGFIX] promlint: Relax metric type in name linter rule. #1455
  • [BUGFIX] promhttp: Make sure server instrumentation wrapping supports new and future extra responseWriter methods. #1480
  • [BUGFIX] testutil: Functions using compareMetricFamilies are now failing if filtered metricNames are not in the input. #1424

... (truncated)

Changelog

Sourced from github.com/prometheus/client_golang's changelog.

1.20.0 / 2024-08-14

  • [CHANGE] :warning: go-collector: Remove go_memstat_lookups_total metric which was always 0; Go runtime stopped sharing pointer lookup statistics. #1577
  • [FEATURE] :warning: go-collector: Add 3 default metrics: go_gc_gogc_percent, go_gc_gomemlimit_bytes and go_sched_gomaxprocs_threads as those are recommended by the Go team. #1559
  • [FEATURE] go-collector: Add more information to all metrics' HELP e.g. the exact runtime/metrics sourcing each metric (if relevant). #1568 #1578
  • [FEATURE] testutil: Add CollectAndFormat method. #1503
  • [FEATURE] histograms: Add support for exemplars in native histograms. #1471
  • [FEATURE] promhttp: Add experimental support for zstd on scrape, controlled by the request Accept-Encoding header. #1496
  • [FEATURE] api/v1: Add WithLimit parameter to all API methods that supports it. #1544
  • [FEATURE] prometheus: Add support for created timestamps in constant histograms and constant summaries. #1537
  • [FEATURE] process-collectors: Add network usage metrics: process_network_receive_bytes_total and process_network_transmit_bytes_total. #1555
  • [FEATURE] promlint: Add duplicated metric lint rule. #1472
  • [BUGFIX] promlint: Relax metric type in name linter rule. #1455
  • [BUGFIX] promhttp: Make sure server instrumentation wrapping supports new and future extra responseWriter methods. #1480
  • [BUGFIX] testutil: Functions using compareMetricFamilies are now failing if filtered metricNames are not in the input. #1424

1.19.0 / 2024-02-27

The module prometheus/common v0.48.0 introduced an incompatibility when used together with client_golang (See prometheus/client_golang#1448 for more details). If your project uses client_golang and you want to use prometheus/common v0.48.0 or higher, please update client_golang to v1.19.0.

  • [CHANGE] Minimum required go version is now 1.20 (we also test client_golang against new 1.22 version). #1445 #1449
  • [FEATURE] collectors: Add version collector. #1422 #1427

1.18.0 / 2023-12-22

  • [FEATURE] promlint: Allow creation of custom metric validations. #1311
  • [FEATURE] Go programs using client_golang can be built in wasip1 OS. #1350
  • [BUGFIX] histograms: Add timer to reset ASAP after bucket limiting has happened. #1367
  • [BUGFIX] testutil: Fix comparison of metrics with empty Help strings. #1378
  • [ENHANCEMENT] Improved performance of MetricVec.WithLabelValues(...). #1360

1.17.0 / 2023-09-27

  • [CHANGE] Minimum required go version is now 1.19 (we also test client_golang against new 1.21 version). #1325
  • [FEATURE] Add support for Created Timestamps in Counters, Summaries and Historams. #1313
  • [ENHANCEMENT] Enable detection of a native histogram without observations. #1314

1.16.0 / 2023-06-15

  • [BUGFIX] api: Switch to POST for LabelNames, Series, and QueryExemplars. #1252
  • [BUGFIX] api: Fix undefined execution order in return statements. #1260
  • [BUGFIX] native histograms: Fix bug in bucket key calculation. #1279
  • [ENHANCEMENT] Reduce constrainLabels allocations for all metrics. #1272
  • [ENHANCEMENT] promhttp: Add process start time header for scrape efficiency. #1278
  • [ENHANCEMENT] promlint: Improve metricUnits runtime. #1286

1.15.1 / 2023-05-3

  • [BUGFIX] Fixed promhttp.Instrument* handlers wrongly trying to attach exemplar to unsupported metrics (e.g. summary),
    causing panics. #1253

... (truncated)

Commits
  • 73b811c Cut 1.20.0 release. (#1580)
  • 7ce5089 gocollector: Attach original runtime/metrics metric name to help. (#1578)
  • 062300e Remove go_memstat_lookups_total; added runtime/metrics calculation to memstat...
  • aa3c00d Update common Prometheus files (#1576)
  • 3ad2722 Add default Go runtime metrics for /gc/gogc:percent, /gc/gomemlimit:bytes, /s...
  • 0715727 Update common Prometheus files (#1573)
  • 3634bd9 ci: daggerize test and lint pipelines (#1534)
  • 28b5e6e Merge pull request #1572 from prometheus/repo_sync
  • 8e18075 Update common Prometheus files
  • 46f77a9 Merge pull request #1571 from prometheus/dependabot/github_actions/github-act...
  • Additional commits viewable in compare view


Updates go.mongodb.org/mongo-driver from 1.16.0 to 1.16.1

Release notes

Sourced from go.mongodb.org/mongo-driver's releases.

MongoDB Go Driver 1.16.1

The MongoDB Go Driver Team is pleased to release version 1.16.1 of the official Go driver.

Release Notes

This release fixes a bug where excessive heartbeat checks would be emitted in polling mode.

For a full list of tickets included in this release, please see the links below:

Full Changelog: v1.16.0...v1.16.1

Documentation for the Go driver can be found on pkg.go.dev and the MongoDB documentation site. BSON library documentation is also available on pkg.go.dev. Questions and inquiries can be asked on the MongoDB Developer Community. Bugs can be reported in the Go Driver project in the MongoDB JIRA where a list of current issues can be found. Your feedback on the Go driver is greatly appreciated!

Commits
  • 9ea6d8e BUMP v1.16.1
  • c8fb3ec GODRIVER-3255 [release/1.16] Await heartbeat checks upto freq when polling (#...
  • 6ac5ab9 GODRIVER-3292 [release/1.16] Pass context to custom mtest monitor (#1736)
  • 9d8f187 update silk asset group
  • See full diff in compare view


Updates golang.org/x/crypto from 0.25.0 to 0.26.0

Commits
  • 5bcd010 go.mod: update golang.org/x dependencies
  • 3375612 ssh: add support for unpadded RSA signatures
  • bb80217 ssh: don't use dsa keys in integration tests
  • 6879722 ssh: remove go 1.21+ dependency on slices
  • e983fa2 sha3: Avo port of keccakf_amd64.s
  • 80fd972 LICENSE: update per Google Legal
  • f2bc3a6 x509roots/fallback/internal/goissue52287: delete
  • d66d9c3 x509roots/fallback: update bundle
  • See full diff in compare view


Updates golang.org/x/net from 0.27.0 to 0.28.0

Commits
  • 4542a42 go.mod: update golang.org/x dependencies
  • 765c7e8 xsrftoken: create no padding base64 string by RawURLEncoding
  • 032e4e4 LICENSE: update per Google Legal
  • See full diff in compare view


Updates golang.org/x/oauth2 from 0.21.0 to 0.22.0

Commits


Updates golang.org/x/time from 0.5.0 to 0.6.0

Commits


Updates google.golang.org/api from 0.189.0 to 0.192.0

Release notes

Sourced from google.golang.org/api's releases.

v0.192.0

0.192.0 (2024-08-13)

Features

Bug Fixes

  • internal/cba: Update credsNewAuth path to use nil oauth2 client (#2731) (b457582)

v0.191.0

0.191.0 (2024-08-07)

Features

Bug Fixes

  • Reference gax import in storage libs (#2720) (fffff7f)
  • transport: Disable automatic universe domain check (#2717) (f5b0bb5)

v0.190.0

0.190.0 (2024-08-01)

Features

Reverts

... (truncated)

Changelog

Sourced from google.golang.org/api's changelog.

0.192.0 (2024-08-13)

Features

Bug Fixes

  • internal/cba: Update credsNewAuth path to use nil oauth2 client (#2731) (b457582)

0.191.0 (2024-08-07)

Features

Bug Fixes

  • Reference gax import in storage libs (#2720) (fffff7f)
  • transport: Disable automatic universe domain check (#2717) (f5b0bb5)

0.190.0 (2024-08-01)

Features

Reverts

Commits
  • c616f47 chore(main): release 0.192.0 (#2726)
  • b457582 fix(internal/cba): Update credsNewAuth path to use nil oauth2 client (#2731)
  • 2b4e9f4 feat: move storage, bigquery, and compute to new auth lib (#2730)
  • a0ed1f3 feat(all): auto-regenerate discovery clients (#2729)
  • 97c7f2e feat(all): auto-regenerate discovery clients (#2728)
  • 36e3fa7 feat(all): auto-regenerate discovery clients (#2727)
  • b2c7c05 feat(all): auto-regenerate discovery clients (#2725)
  • d0759b0 chore(main): release 0.191.0 (#2718)
  • 918e3d2 feat(all): auto-regenerate discovery clients (#2724)
  • 0d15913 feat(all): auto-regenerate discovery clients (#2722)
  • Additional commits viewable in compare view


Updates k8s.io/apimachinery from 0.31.0-beta.0 to 0.32.0-alpha.0

Commits
  • 95b7802 Merge pull request #126231 from seans3/websocket-https-proxy-fix
  • a8f449e Falls back to SPDY for gorilla/websocket https proxy error
  • 62791ec Merge pull request #125571 from liggitt/filter-auth-02-sar
  • cc2ba35 add field and label selectors to authorization attributes
  • ce76a8f generate
  • 35052c5 add subjectaccessreview field and label selectors
  • See full diff in compare view


Updates k8s.io/client-go from 0.31.0-beta.0 to 0.32.0-alpha.0

Commits
dependabot[bot] commented 1 month ago

Superseded by #1036.