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ohsu-comp-bio / funnel

Funnel is a toolkit for distributed task execution via a simple, standard API.
https://ohsu-comp-bio.github.io/funnel
MIT License
121 stars 32 forks source link

build(deps): bump the dependabot group across 1 directory with 14 updates #987

Closed dependabot[bot] closed 4 months ago

dependabot[bot] commented 4 months ago

Bumps the dependabot group with 12 updates in the / directory:

Package From To
cloud.google.com/go/datastore 1.16.0 1.17.0
cloud.google.com/go/pubsub 1.37.0 1.38.0
github.com/aws/aws-sdk-go 1.52.3 1.53.19
github.com/docker/docker 26.1.1+incompatible 26.1.4+incompatible
github.com/go-test/deep 1.0.8 1.1.0
github.com/prometheus/client_golang 1.19.0 1.19.1
github.com/prometheus/common 0.53.0 0.54.0
golang.org/x/crypto 0.23.0 0.24.0
golang.org/x/net 0.25.0 0.26.0
golang.org/x/oauth2 0.20.0 0.21.0
google.golang.org/grpc 1.63.2 1.64.0
github.com/grpc-ecosystem/grpc-gateway/v2 2.19.1 2.20.0

Updates cloud.google.com/go/datastore from 1.16.0 to 1.17.0

Release notes

Sourced from cloud.google.com/go/datastore's releases.

datastore: v1.17.0

1.17.0 (2024-05-08)

Features

kms: v1.17.0

1.17.0 (2024-05-16)

Features

  • kms: Add client library for KMS Autokey service, which enables automated KMS key provision and management (292e812)

security: v1.17.0

1.17.0 (2024-05-22)

Features

retail: v1.16.2

1.16.2 (2024-05-01)

Bug Fixes

  • retail: Bump x/net to v0.24.0 (ba31ed5)

security: v1.16.1

1.16.1 (2024-05-01)

Bug Fixes

  • security: Bump x/net to v0.24.0 (ba31ed5)
Changelog

Sourced from cloud.google.com/go/datastore's changelog.

1.17.0 (2023-03-15)

Features

  • documentai: Added hints.language_hints field in OcrConfig (#7522) (b2c40c3)
Commits


Updates cloud.google.com/go/pubsub from 1.37.0 to 1.38.0

Release notes

Sourced from cloud.google.com/go/pubsub's releases.

pubsub: v1.38.0

1.38.0 (2024-05-06)

Features

  • pubsub: Add custom datetime format for Cloud Storage subscriptions (4834425)
  • pubsub: Support publisher compression (#9711) (4940c3c)
  • pubsub: Use Streaming Pull response for ordering check (#9682) (7bf4904)

Bug Fixes

  • pubsub: Bump x/net to v0.24.0 (ba31ed5)
  • pubsub: Respect gRPC dial option when PUBSUB_EMULATOR_HOST is set (#10040) (95bf6b2)
  • pubsub: Update protobuf dep to v1.33.0 (30b038d)
Commits
  • aaf7fa2 chore(main): release pubsub 1.38.0 (#9589)
  • 95bf6b2 fix(pubsub): respect gRPC dial option when PUBSUB_EMULATOR_HOST is set (#10040)
  • 0183dd5 chore(main): release vertexai 0.8.0 (#9535)
  • c07f1e4 fix(spanner): update staleness bound (#10118)
  • b91f658 test(spanner): fix retry unit tests with RESOURCE_EXHAUSTED errors (#10117)
  • b9b55e0 chore(thirdparty): remove json-iterator exemption (#10113)
  • fafaf0d fix(internal/aliasfix): handle import paths correctly (#10097)
  • 63f947d chore(spanner): use time.Since instead of time.Now().Sub (#10096)
  • a4a8fbc docs: update copyright year in Fleet Engine (#10090)
  • 9013e52 feat(auth): Enable client certificates by default (#10102)
  • Additional commits viewable in compare view


Updates github.com/aws/aws-sdk-go from 1.52.3 to 1.53.19

Release notes

Sourced from github.com/aws/aws-sdk-go's releases.

Release v1.53.19 (2024-06-07)

Service Client Updates

  • service/auditmanager: Updates service API and documentation
  • service/b2bi: Updates service API
  • service/codepipeline: Updates service API and documentation
    • CodePipeline now supports overriding S3 Source Object Key during StartPipelineExecution, as part of Source Overrides.
  • service/sagemaker: Updates service API and documentation
    • This release introduces a new optional parameter: InferenceAmiVersion, in ProductionVariant.
  • service/verifiedpermissions: Updates service API and documentation

Release v1.53.18 (2024-06-06)

Service Client Updates

  • service/account: Updates service API and documentation
  • service/firehose: Updates service API and documentation
    • Adds integration with Secrets Manager for Redshift, Splunk, HttpEndpoint, and Snowflake destinations
  • service/fsx: Updates service API and documentation
  • service/glue: Updates service API and documentation
    • This release adds support for creating and updating Glue Data Catalog Views.
  • service/iotwireless: Updates service API
  • service/location: Updates service API, documentation, and paginators
  • service/sns: Updates service API and documentation
    • Doc-only update for SNS. These changes include customer-reported issues and TXC3 updates.
  • service/sqs: Updates service API and documentation
    • Doc only updates for SQS. These updates include customer-reported issues and TCX3 modifications.
  • service/storagegateway: Updates service API and documentation
    • Adds SoftwareUpdatePreferences to DescribeMaintenanceStartTime and UpdateMaintenanceStartTime, a structure which contains AutomaticUpdatePolicy.

Release v1.53.17 (2024-06-05)

Service Client Updates

  • service/globalaccelerator: Updates service API and documentation
  • service/glue: Updates service API and documentation
    • AWS Glue now supports native SaaS connectivity: Salesforce connector available now
  • service/s3: Updates service API and examples
    • Added new params copySource and key to copyObject API for supporting S3 Access Grants plugin. These changes will not change any of the existing S3 API functionality.

Release v1.53.16 (2024-06-04)

Service Client Updates

  • service/ec2: Updates service API
    • U7i instances with up to 32 TiB of DDR5 memory and 896 vCPUs are now available. C7i-flex instances are launched and are lower-priced variants of the Amazon EC2 C7i instances that offer a baseline level of CPU performance with the ability to scale up to the full compute performance 95% of the time.
  • service/pipes: Updates service API, documentation, and waiters
  • service/sagemaker: Updates service API and documentation
    • Extend DescribeClusterNode response with private DNS hostname and IP address, and placement information about availability zone and availability zone ID.

... (truncated)

Commits


Updates github.com/docker/docker from 26.1.1+incompatible to 26.1.4+incompatible

Release notes

Sourced from github.com/docker/docker's releases.

v26.1.4

26.1.4

For a full list of pull requests and changes in this release, refer to the relevant GitHub milestones:

Security

This release updates the Go runtime to 1.21.11 which contains security fixes for:

Bug fixes and enhancements

  • Fixed an issue where promoting a node immediately after another node was demoted could cause the promotion to fail. moby/moby#47870
  • Prevent the daemon log from being spammed with superfluous response.WriteHeader call ... messages.. moby/moby#47843
  • Don't show empty hints when plugins return an empty hook message. docker/cli#5083
  • Added ContextType: "moby" to the context list/inspect output to address a compatibility issue with Visual Studio Container Tools. docker/cli#5095
  • Fix a compatibility issue with Visual Studio Container Tools. docker/cli#5095

Packaging updates

v26.1.3

26.1.3

For a full list of pull requests and changes in this release, refer to the relevant GitHub milestones:

Bug fixes and enhancements

  • Fix a regression that prevented the use of DNS servers within a --internal network. moby/moby#47832
  • When the internal DNS server's own address is supplied as an external server address, ignore it to avoid unproductive recursion. moby/moby#47833

Packaging updates

... (truncated)

Commits
  • de5c9cf Merge pull request #47912 from thaJeztah/26.1_backport_vendor_containerd_1.7.18
  • c62dcf8 Merge pull request #47911 from thaJeztah/26.1_backport_bump_containerd_binary...
  • 17315a2 vendor: github.com/containerd/containerd v1.7.18
  • cbd9418 update containerd binary to v1.7.18
  • fb9f72a Merge pull request #47904 from thaJeztah/26.1_backport_bump_go1.21.11
  • 3115daa update to go1.21.11
  • 2861734 Merge pull request #47892 from thaJeztah/26.1_backport_api_docs_network_confi...
  • 9c95aea Merge pull request #47893 from thaJeztah/26.1_backport_bump_docker_py
  • 3e09e19 Merge pull request #47894 from thaJeztah/26.1_backport_vendor_containerd_v1.7.17
  • 65b679a Merge pull request #47889 from thaJeztah/26.1_backport_platforms_err_handling
  • Additional commits viewable in compare view


Updates github.com/go-test/deep from 1.0.8 to 1.1.0

Release notes

Sourced from github.com/go-test/deep's releases.

v1.1.0

New minor release, v1.1, that adds support for optional flags.

What's Changed

Full Changelog: https://github.com/go-test/deep/compare/v1.0.9...v1.1.0

v1.0.9

What's Changed

Full Changelog: https://github.com/go-test/deep/compare/v1.0.8...v1.0.9

Changelog

Sourced from github.com/go-test/deep's changelog.

v1.1.0 released 2022-12-09

  • Add optional flags: Equal(a, b, flags..) and FLAG_IGNORE_SLICE_ORDER (issue #28, PR #56) (@​alenkacz)

v1.0.9 released 2022-12-09

  • Fixed issue #45: Panic when comparing errors in unexported fields (PR #54) (@​seveas)
  • Fixed issue #46: Functions are handled differently from reflect.DeepEqual (PR #55) (@​countcb)
  • Updated matrix to go1.17, go1.18, and go1.19 and moved testing to GitHub Actions
Commits
  • 2f12927 Merge pull request #56 from go-test/issue-28-and-flags
  • d502c9f Merge branch 'master' into issue-28-and-flags
  • b036568 Update changelog for v1.0.9
  • 55ce24e Improve docs and add a test
  • 1a1ed62 Remove dead code comment
  • f39112b Sort strings in TestSliceOrderString to avoid false positives
  • a20c9ea Implment issue 28 with FLAG_IGNORE_SLICE_ORDER
  • 47c10a1 Merge pull request #55 from go-test/cmp-func-issue-46
  • d97d7b6 Make TestNotHandled work with Go 1.17
  • 847b043 Add back TestNotHandled for 100% coverage
  • Additional commits viewable in compare view


Updates github.com/prometheus/client_golang from 1.19.0 to 1.19.1

Release notes

Sourced from github.com/prometheus/client_golang's releases.

v1.19.1

What's Changed

  • Security patches for golang.org/x/sys and google.golang.org/protobuf

New Contributors

Full Changelog: https://github.com/prometheus/client_golang/compare/v1.19.0...v1.19.1

Changelog

Sourced from github.com/prometheus/client_golang's changelog.

Unreleased

Commits


Updates github.com/prometheus/common from 0.53.0 to 0.54.0

Release notes

Sourced from github.com/prometheus/common's releases.

v0.54.0

What's Changed

New Contributors

Full Changelog: https://github.com/prometheus/common/compare/v0.53.0...v0.54.0

Commits
  • 789222a Merge pull request #627 from freak12techno/add-time-template-helpers
  • b2fc541 Merge branch 'main' into add-time-template-helpers
  • 9f1953b chore: review fixes
  • 4f7cf6e Update helpers/templates/convert_to_float.go
  • b9d8f7c Update helpers/templates/humanize_duration.go
  • 80e630e Update helpers/templates/humamize_duration_test.go
  • 6846990 Bump github.com/prometheus/client_golang from 1.19.0 to 1.19.1 in /sigv4 (#639)
  • f93a89e Bump github.com/aws/aws-sdk-go from 1.51.32 to 1.53.14 in /sigv4 (#638)
  • 3ddc148 Merge pull request #636 from prometheus/repo_sync
  • 2b9d805 Update common Prometheus files
  • Additional commits viewable in compare view


Updates golang.org/x/crypto from 0.23.0 to 0.24.0

Commits
  • 332fd65 go.mod: update golang.org/x dependencies
  • 0b431c7 x509roots/fallback: update bundle
  • 349231f ssh: implement CryptoPublicKey on sk keys
  • 44c9b0f ssh: allow server auth callbacks to send additional banners
  • 67b1361 sha3: reenable s390x assembly
  • 477a5b4 sha3: make APIs usable with zero allocations
  • 59b5a86 sha3: disable s390x assembly
  • 10f366e sha3: simplify XOR functions
  • See full diff in compare view


Updates golang.org/x/net from 0.25.0 to 0.26.0

Commits
  • 66e838c go.mod: update golang.org/x dependencies
  • 6249541 http2: avoid race in server handler SetReadDeadine/SetWriteDeadline
  • 603e3e6 quic: disable X25519Kyber768Draft00 in tests
  • 67e8d0c http2: report an error if goroutines outlive serverTester tests
  • 5608279 http2: avoid corruption in priority write scheduler
  • 0d515a5 http2: factor out frame read/write test functions
  • 9f5b79b http2: drop unused retry function
  • 03c24c2 http2: use synthetic time in server tests
  • 022530c http2: add a more full-featured test net.Conn
  • 410d19e http2: avoid racy access to clientStream.requestedGzip
  • Additional commits viewable in compare view


Updates golang.org/x/oauth2 from 0.20.0 to 0.21.0

Commits


Updates google.golang.org/api from 0.177.0 to 0.178.0

Release notes

Sourced from google.golang.org/api's releases.

v0.178.0

0.178.0 (2024-05-07)

Features

Documentation

Changelog

Sourced from google.golang.org/api's changelog.

0.178.0 (2024-05-07)

Features

Documentation

Commits


Updates google.golang.org/grpc from 1.63.2 to 1.64.0

Release notes

Sourced from google.golang.org/grpc's releases.

Release 1.64.0

API Changes

  • stats: Deprecate InPayload.Data and OutPayload.Data; they were experimental and will be deleted in the next release (#7121)

Behavior Changes

  • codec: Remove handling of environment variable GRPC_GO_ADVERTISE_COMPRESSORS to suppress setting supported compressors in grpc-accept-encoding header. Compressors will always be advertised, as they have been by default for some time (#7203)

New Features

  • resolver/dns: Add SetMinResolutionInterval to set the minimum interval at which DNS re-resolutions may occur (#6962)
  • peer/peer: Implement the fmt.Stringer interface for pretty printing Peer, and
  • metadata/metadata: Implement the fmt.Stringer interface for pretty printing MD (#7137)

Performance Improvements

  • client: Improve RPC performance by reducing work while holding a lock (#7132)

Bug Fixes

  • transport/server: Display the proper timeout value when keepalive pings are not ack'd in time (#7038)
  • channelz: Fix bug that was causing the subchannel's target to be unset (#7189)
  • stats: Fix bug where peer was not set in context when calling stats handler for OutPayload, InPayload, and End (#7096)

Dependencies

  • deps: Remove dependency on deprecated github.com/golang/protobuf module (#7122)

Documentation

  • grpc: Deprecate WithBlock, WithReturnConnectionError, FailOnNonTempDialError which are ignored by NewClient (#7097)
  • grpc: Deprecate Dial and DialContext. These will continue to be supported throughout 1.x, but are deprecated to direct users to NewClient (See #7090 for more information)
  • examples: Add custom lb example (#6691)
Commits
  • fa274d7 Change version to 1.64.0 (#7218)
  • 6b413c8 xds: Surround two Infof calls that use pretty.ToJSON with V(2) checks (...
  • 2dbbcef resolver/dns: Add docstring to SetMinResolutionInterval (#7217)
  • 070d9c7 codes: replace %q to %d in error string when invalid code is an integer (#7188)
  • 5d24ee2 xds: store server config for LRS server in xdsresource.ClusterUpdate (#7191)
  • c76f686 advancedTLS: Rename get root certs related pieces (#7207)
  • f591e3b codec: remove option to suppress setting supported compressors in headers (#7...
  • b4f7947 github: remove dependabot (#7208)
  • 0561c78 client: add user-friendly error message of LB policy update timed out (#7206)
  • 9d9c1fb peer: remove change detector test (#7204)
  • Additional commits viewable in compare view


Updates github.com/grpc-ecosystem/grpc-gateway/v2 from 2.19.1 to 2.20.0

Release notes

Sourced from github.com/grpc-ecosystem/grpc-gateway/v2's releases.

v2.20.0

What's Changed

New Contributors

netlify[bot] commented 4 months ago

Deploy Preview for ohsu-comp-bio-funnel canceled.

Name Link
Latest commit 4e5e863db494eeda68a6ad3cf1b89160af868d57
Latest deploy log https://app.netlify.com/sites/ohsu-comp-bio-funnel/deploys/6666e65757057200085af1bb
dependabot[bot] commented 4 months ago

Looks like these dependencies are updatable in another way, so this is no longer needed.