Fixes to genomic_landscape

oicr-gsi / djerba

Create cancer bioinformatics reports from metadata and workflow output

GNU General Public License v3.0

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Fixes to genomic_landscape #436

Closed iainrb closed 2 months ago

iainrb commented 2 months ago

GCGI-1355, GCGI-1403, GCGI-1404: Fixes for genomic landscape plugin. Do not report therapies for HRD/MSI unless purity/sample criteria pass; check input/output/paths; remove obsolete code.