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oicr-gsi
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djerba
Create cancer bioinformatics reports from metadata and workflow output
GNU General Public License v3.0
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3
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Gcgi 1377 report id default to req
#428
AqsaAlam
closed
2 months ago
0
Release 1.6.5
#427
iainrb
closed
3 months ago
0
Update checksums
#426
iainrb
closed
3 months ago
0
Update version and pdf
#425
iainrb
closed
3 months ago
0
Update README
#424
iainrb
closed
3 months ago
0
Revert "First demo release"
#423
iainrb
closed
3 months ago
0
First demo release
#422
iainrb
closed
3 months ago
0
Changed whizbam project to default to project
#421
AqsaAlam
closed
3 months ago
0
Gcgi 1387 fusion no effect to unknown
#420
AqsaAlam
closed
3 months ago
0
Gcgi 1336 cannot resolve assay
#419
AqsaAlam
closed
3 months ago
0
Release 1.6.4
#418
AqsaAlam
closed
3 months ago
0
Treatment merger test
#417
OumaimaHamza
closed
3 months ago
0
Gcgi 1262 remove abcb1 from tar
#416
AqsaAlam
closed
1 month ago
0
Changed tumour sample ID to plasma sample ID and updated changelog an…
#415
AqsaAlam
closed
3 months ago
0
Fixed cannot resolve assay issue and updated tests
#414
AqsaAlam
closed
3 months ago
0
Gcgi 1382 fix tar disclaimer
#413
AqsaAlam
closed
3 months ago
0
increment version numbers in assay descriptions
#412
iainrb
closed
3 months ago
0
Release 1.6.3
#411
iainrb
closed
3 months ago
0
Update pipeline version, tests and changelog
#410
iainrb
closed
3 months ago
0
Use a blank white image as a spacer in the "Report Sign-Offs" section
#409
iainrb
closed
3 months ago
0
Gcgi 1368 remove tar snvindel purity dependency
#408
AqsaAlam
closed
3 months ago
0
Fixed TAR to deal with unclean input maf files
#407
AqsaAlam
closed
4 months ago
0
Release 1.6.2
#406
iainrb
closed
4 months ago
0
Added biotype = protein_coding to maf filtering
#405
AqsaAlam
closed
4 months ago
0
Added BIOTYPE = protein_coding to maf filtering
#404
AqsaAlam
closed
4 months ago
0
Edited requisition hierarchy in pwgs cardea helper
#403
AqsaAlam
closed
4 months ago
0
Correctly handle missing subcommand name in djerba.py
#402
iainrb
closed
4 months ago
0
Fix gcgi 1362 remove sequenza script
#401
iainrb
closed
4 months ago
0
Release 1.6.1
#400
iainrb
closed
5 months ago
0
Release 1.6.0
#399
iainrb
closed
5 months ago
0
Fix gcgi 1352 update examples
#398
iainrb
closed
5 months ago
0
Fix gcgi 1346 release testing
#397
iainrb
closed
5 months ago
0
Merge changes from release v1.5.6 and fix conflicts
#396
iainrb
closed
5 months ago
0
Release 1.5.6
#395
AqsaAlam
closed
5 months ago
0
Changed always to auto for whitespace option in gene information merger
#394
AqsaAlam
closed
5 months ago
0
Changed TERT protein annotation
#393
AqsaAlam
closed
5 months ago
0
Adjusting pWGS e-signature spacing
#392
OumaimaHamza
closed
5 months ago
0
Fix gcgi 1348 benchmark tests
#391
iainrb
closed
5 months ago
0
Update plugin lists for djerba.py setup mode
#390
AqsaAlam
closed
5 months ago
0
Update checksums; tests on 1.6.0 release branch now pass
#389
iainrb
closed
5 months ago
0
Dev gcgi 1344 checksum fix
#388
iainrb
closed
5 months ago
0
Write updated JSON by default, with a more informative name
#387
iainrb
closed
5 months ago
0
Add loh to disclaimer
#386
AqsaAlam
closed
5 months ago
0
pWGS formatting fixes
#385
OumaimaHamza
closed
5 months ago
0
Remove obsolete provenance_tools from genomic_landscape
#384
iainrb
closed
6 months ago
0
Import the traceback module in core.render
#383
iainrb
closed
6 months ago
0
Fix remove copy state
#382
AqsaAlam
closed
6 months ago
0
Fix case_overview config
#381
iainrb
closed
6 months ago
0
Set up Github Actions to update gene list
#380
OumaimaHamza
opened
6 months ago
0
Setting Github Actions to update gene list
#379
OumaimaHamza
closed
6 months ago
0
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