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oicr-gsi / robust-paper

Ten Simple Rules for Making Research Software More Robust. Manuscript is published at PLoS Computational Biology. Feedback is welcome!
https://doi.org/10.1371/journal.pcbi.1005412
MIT License
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Early thoughts on rough draft #1

Closed gvwilson closed 8 years ago

gvwilson commented 8 years ago
  1. Added a few more points and FIXME markers.
  2. Suggested getting parameters from either command line or config file (happy to take out latter).
  3. Suggested program should always echo settings to output to aid reproducibility.

Q: hard-wrap paragraphs or not? I prefer the former (makes diffs easy to read), but will defer to house style.

morgantaschuk commented 8 years ago

Thanks for the suggestions. You committed a ~ file, which I believe is a temp file that vim adds? Please remove it.

I have no house style so I'm good with anything. I agree that the diffs are currently hard to detangle. Does 'hard wrap' simply mean we cut off lines at 80 characters with a line break?

gvwilson commented 8 years ago

Yes please (regarding 80char lines).