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oist / optinist

calcium imaging pipeline tool
GNU General Public License v3.0
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codespell: config, workflow + some typos fixed using codespell. #552

Closed yarikoptic closed 9 months ago

yarikoptic commented 1 year ago

note that some typo fixes are "functional" - fixing (I think) possible issues which might have lingered around and were not detected due to not being unittests covered? Also note that some typos are "incorporated" within pickled files, e.g.

❯ git grep discription
Binary file sample_data/workflows/output/51009510/caiman_cnmf_1qpzy3hekw/caiman_cnmf.pkl matches
Binary file sample_data/workflows/output/51009510/correlation_ribhh6ohae/correlation.pkl matches
Binary file sample_data/workflows/output/51009510/eta_ulbn0meve0/eta.pkl matches
Binary file sample_data/workflows/output/7f8fbba5/correlation_onyx5cah3a/correlation.pkl matches
Binary file sample_data/workflows/output/7f8fbba5/suite2p_roi_ib1necv3e5/suite2p_roi.pkl matches

Not sure if it has any ramification

ReiHashimoto commented 9 months ago

@yarikoptic Thank you for your advice. We've introduced codespell check on GitHub actions and pre-commit in ver1.1.0. So, I would close this PR.