oist / optinist

calcium imaging pipeline tool
GNU General Public License v3.0
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Caiman_mc rois ?? #611

Open milesOIST opened 6 months ago

milesOIST commented 6 months ago

追加機能についての概要 Caiman_mc produces a variable rois, which has many more ROIs than cell_roi. However rois are not selectable. If you do select them you get this error:

Uncaught runtime errors:
ERROR
Cannot read properties of undefined (reading 'y')
TypeError: Cannot read properties of undefined (reading 'y')
    at http://localhost:3000/static/js/bundle.js:18478:24
    at Array.map (<anonymous>)
    at http://localhost:3000/static/js/bundle.js:18475:26
    at updateMemo (http://localhost:3000/static/js/bundle.js:411298:23)
    at Object.useMemo (http://localhost:3000/static/js/bundle.js:411874:20)
    at useMemo (http://localhost:3000/static/js/bundle.js:433788:25)
    at TimeSeriesPlotImple (http://localhost:3000/static/js/bundle.js:18473:69)
    at renderWithHooks (http://localhost:3000/static/js/bundle.js:410509:22)
    at updateFunctionComponent (http://localhost:3000/static/js/bundle.js:413391:24)
    at updateSimpleMemoComponent (http://localhost:3000/static/js/bundle.js:413253:14)
ERROR
Cannot read properties of undefined (reading 'y')
TypeError: Cannot read properties of undefined (reading 'y')
    at http://localhost:3000/static/js/bundle.js:18478:24
    at Array.map (<anonymous>)
    at http://localhost:3000/static/js/bundle.js:18475:26
    at updateMemo (http://localhost:3000/static/js/bundle.js:411298:23)
    at Object.useMemo (http://localhost:3000/static/js/bundle.js:411874:20)
    at useMemo (http://localhost:3000/static/js/bundle.js:433788:25)
    at TimeSeriesPlotImple (http://localhost:3000/static/js/bundle.js:18473:69)
    at renderWithHooks (http://localhost:3000/static/js/bundle.js:410509:22)
    at updateFunctionComponent (http://localhost:3000/static/js/bundle.js:413391:24)
    at updateSimpleMemoComponent (http://localhost:3000/static/js/bundle.js:413253:14)
ERROR
Cannot read properties of undefined (reading 'y')
TypeError: Cannot read properties of undefined (reading 'y')
    at http://localhost:3000/static/js/bundle.js:18478:24
    at Array.map (<anonymous>)
    at http://localhost:3000/static/js/bundle.js:18475:26
    at updateMemo (http://localhost:3000/static/js/bundle.js:411298:23)
    at Object.useMemo (http://localhost:3000/static/js/bundle.js:411874:20)
    at useMemo (http://localhost:3000/static/js/bundle.js:433788:25)
    at TimeSeriesPlotImple (http://localhost:3000/static/js/bundle.js:18473:69)
    at renderWithHooks (http://localhost:3000/static/js/bundle.js:410509:22)
    at updateFunctionComponent (http://localhost:3000/static/js/bundle.js:413391:24)
    at updateSimpleMemoComponent (http://localhost:3000/static/js/bundle.js:413253:14)
ERROR
this.container.removeAllListeners is not a function
TypeError: this.container.removeAllListeners is not a function
    at PlotlyChart.attachListeners (http://localhost:3000/static/js/bundle.js:423790:22)
    at PlotlyChart.<anonymous> (http://localhost:3000/static/js/bundle.js:423728:20)
    at step (http://localhost:3000/static/js/bundle.js:423671:17)
    at Object.next (http://localhost:3000/static/js/bundle.js:423620:14)
    at fulfilled (http://localhost:3000/static/js/bundle.js:423577:24)
ERROR
gd.emit is not a function
TypeError: gd.emit is not a function
    at http://localhost:3000/static/js/bundle.js:265158:8
ERROR
gd.emit is not a function
TypeError: gd.emit is not a function
    at http://localhost:3000/static/js/bundle.js:265158:8

It is also a bit surprising that caiman_cnmf finds only 6 ROIs (in all_roi) with the sample data set. I wonder the actual full number of ROIs is in rois, but these are no displayed.

Screenshot 2023-12-12 at 10 44 10 Screenshot 2023-12-12 at 10 43 21

高: この機能を早急に対応しなければ、他の開発に影響を与える。

ブランチ名 develop-main