Olgabot/split kmer - Githubissues

This PR will allow users the ability to use the Split Kmer Analysis package for kmer comparisons. Also includes a truncate step to subsample input fastqs with seqtk.

PR checklist

[x] This comment contains a description of changes (with reason)
[x] If you've fixed a bug or added code that should be tested, add tests!
[x] If necessary, also make a PR on the nf-core/kmer-similarity branch on the nf-core/test-datasets repo
[x] Ensure the test suite passes (nextflow run . -profile test,docker).
[x] Make sure your code lints (nf-core lint .).
[x] Documentation in docs is updated
[x] CHANGELOG.md is updated
[x] README.md is updated

Learn more about contributing: https://github.com/nf-core/kmer-similarity/tree/master/.github/CONTRIBUTING.md

olgabot / nf-kmer-similarity

Olgabot/split kmer #29

PR checklist