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oljagrk / jmodeltest2

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Analysis starts but doesn't progress #12

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 
What steps will reproduce the problem?
1. Loading alignment file (~550 sequences)
2.Starting "Compute likelyhood scores"
3.Running modeltest with any (5,7 or 11 models)

What is the expected output? What do you see instead?
The "running window" appears. Even after 24 hours no progress is visible. the 
counter stays on 0% and it is still running on the first model.

What version of the product are you using? On what operating system?
Jmodeltest 2.1.1 running on Winodws 7 and the latest Java (including recent 
updates)

Original issue reported on code.google.com by lavi...@gmail.com on 26 Sep 2012 at 3:35

GoogleCodeExporter commented 9 years ago 
PhyML usually is not able to manage such a huge amount of taxa. Probably next 
jModelTest versions would be able to work with large alignments but not at this 
moment. We are sorry.

Original comment by DiegoDL84 on 17 Dec 2012 at 3:07