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Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
https://www.openmicroscopy.org/bio-formats
GNU General Public License v2.0
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OME-TIFF saving differently on windows vs linux? #3840

Open noamza opened 2 years ago

noamza commented 2 years ago

I am trying to debug an issue and I noticed another python module that I am using (https://pypi.org/project/scanimage-tiff-reader/), only throws errors on OME-TIFFs that I save through ImageJ(1.53q) running on ubuntu linux, but not when I save them using ImageJ(1.52p) running on windows. Now I am not sure if this is because the ImageJ versions are different or if it's because one is running on windows and one is on linux, but if you have any insight into this I would greatly appreciate it. Thanks you

sbesson commented 2 years ago

@noamza do you have public samples of typical files (ideally from the same source) saved under both systems that you could share either in this issue if it's small enough or by uploading them to https://zenodo.org/ ?