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ome / bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
https://www.openmicroscopy.org/bio-formats
GNU General Public License v2.0
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Imaris HDF: populate channel names #4112

Closed melissalinkert closed 6 months ago

melissalinkert commented 8 months ago

See https://forum.image.sc/t/imaris-files-and-qupath/88061 and file copied to inbox/imagesc-88061.

As noted in the commit message, this appears to have been an oversight dating to the early days of this reader, as the channel names were already parsed correctly.

This does require configuration changes; a corresponding PR is forthcoming.

imagesc-bot commented 8 months ago

This pull request has been mentioned on Image.sc Forum. There might be relevant details there:

https://forum.image.sc/t/imaris-files-and-qupath/88061/2