CZI: fix image naming, especially for attachments

ome / bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

https://www.openmicroscopy.org/bio-formats

GNU General Public License v2.0

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CZI: fix image naming, especially for attachments #4141

Closed melissalinkert closed 8 months ago

melissalinkert commented 8 months ago

Fixes #4103. Makes use of the new image name test from #4114.

A configuration PR is forthcoming that demonstrates affected data. For datasets with changed names, compare the name and actual image with and without this PR to verify that this fixes label and macro naming. Multi-scene and plate data should also now have unflattened names that reflect the acquisition type, instead of just Scene #1 etc.

dgault commented 8 months ago

1 failure in the nightly repo tests: https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-test-folder/45331/consoleFull