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ome / bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
https://www.openmicroscopy.org/bio-formats
GNU General Public License v2.0
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SVS/MinimalTiffReader: FormatException: No IFDs found #4192

Closed dominikl closed 3 months ago

dominikl commented 3 months ago

See QA 41683

loci.formats.FormatException: No IFDs found
    at loci.formats.in.MinimalTiffReader.initFile(MinimalTiffReader.java:470)
    at loci.formats.in.BaseTiffReader.initFile(BaseTiffReader.java:609)
    at loci.formats.FormatReader.setId(FormatReader.java:1443)
    at loci.formats.ImageReader.setId(ImageReader.java:849)
    at ome.formats.importer.OMEROWrapper$4.setId(OMEROWrapper.java:167)
    at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:650)
...
melissalinkert commented 3 months ago

This file has likely been truncated, as the offset to the first IFD exceeds the length of the file. Both tiffinfo and ImageScope confirm that the file cannot be read, so there isn't much we can do.