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ome / ome-zarr-py

Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
https://pypi.org/project/ome-zarr
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Dump sample scripts - maybe add to docs #303

Open will-moore opened 1 year ago

will-moore commented 1 year ago

Several forum discussions etc have asked for more detailed examples on how to write OME-Zarr.

WIP...

joshmoore commented 10 months ago

Anything you need here, @will-moore ?

will-moore commented 10 months ago

@joshmoore Thanks for the ping. Do you think these look useful and they are in line with "best practice" for how to achieve what was asked for in https://forum.image.sc/t/writing-tile-wise-ome-zarr-with-pyramid-size/85063?

If so, I'll tidy them up, add a few words of intro/explanation etc.

imagesc-bot commented 1 month ago

This pull request has been mentioned on Image.sc Forum. There might be relevant details there:

https://forum.image.sc/t/weird-convertion-error-about-ngff-converter/101997/2

imagesc-bot commented 1 month ago

This pull request has been mentioned on Image.sc Forum. There might be relevant details there:

https://forum.image.sc/t/write-sparse-ome-zarr-or-ome-tiff-with-spatial-offset/101906/6