Closed dominikl closed 3 weeks ago
I added resave.py to my $PATH by linking it into my ~/bin directory:
(test_env) [dlindner@pilot-zarr3-dev 056332bf08fbc3c3a93cb893674f85]$ ls -lh ~/bin/
total 16K
lrwxrwxrwx. 1 dlindner dlindner 40 Jul 31 10:38 resave.py -> ../ome2024-ngff-challenge/dev2/resave.py
Maybe it doesn't like being called like that? But then I'd expect some kind of error output...
https://pypi.org/project/ome2024-ngff-challenge/ (v0.0.4) is now in place if you want to give it a try. I don't know that it's going to make much of a difference though.
I tried resave.py on an image from idr0157 (converted to zarr with bioformats2raw). But the 'resaved' zarr only contains a zarr.json, nothing else:
Unfortunately there isn't any other useful output.