Closed will-moore closed 2 years ago
@sbesson I think this is ready to review now, with latest https://github.com/ome/ome-zarr-py/pull/162 (both updated to use coordinateTransforms
).
Used this PR in it's current state to export from IDR: https://minio-dev.openmicroscopy.org/idr/v0.4/2022-02-03/idr0062/6001240.zarr (with labels).
As discussed in https://github.com/ome/omero-cli-zarr/pull/93#discussion_r790864982 the API for
write_multiscales_metadata()
has changed in ome/ome-zarr-py#162 and this PR uses that new API.Also, this now exports
scales
metadata as a list[1, 1, 0.5, 0.3, 0.3]
instead of usingaxesIndices
.