The initial logic for creating an hyperlink from the study to their associated publication makes extensive use of the PubMed ID metadata stored in the top-level container annotation - see
This assumption typically makes sense as the majority of published manuscripts associated with IDR studies are indexed by MEDLINE. However, we discovered recently this statement does not hold for all journals/publications e.g. https://doi.org/10.1038/s43018-020-0026-6 / idr0076.
For handling this type of scenario, it might make sense to use the Publication DOI value as the authoritative source of truth about whether a paper has been published in a journal and:
either update gallery to unconditionally point to the journal DOI rather than PubMed
and/or keep the PubMed URL whenever applicable and use the journal DOI as a fallback mechanism
The initial logic for creating an hyperlink from the study to their associated publication makes extensive use of the
PubMed IDmetadata stored in the top-level container annotation - seehttps://github.com/ome/omero-gallery/blob/352a9bcc227bf35ca63a3735b19d1a641dab0af5/src/categories.js#L266-L270 https://github.com/ome/omero-gallery/blob/bd3b20e8b5bb5b6240b97e3cc5d60d702df7764d/src/search.js#L558-L568
This assumption typically makes sense as the majority of published manuscripts associated with IDR studies are indexed by MEDLINE. However, we discovered recently this statement does not hold for all journals/publications e.g. https://doi.org/10.1038/s43018-020-0026-6 / idr0076.
For handling this type of scenario, it might make sense to use the
Publication DOIvalue as the authoritative source of truth about whether a paper has been published in a journal and:/cc @francesw