ome / omero-ms-zarr

Experimental micro-service for implementing the Zarr spec over HTTP
https://www.openmicroscopy.org/omero
GNU General Public License v2.0
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fetch-ms-zarr.py merges group & array? #41

Closed joshmoore closed 4 years ago

joshmoore commented 4 years ago
$ python src/scripts/fetch-ms-zarr.py --endpoint-url http://localhost:8080/ --nested-local 1
(py36) /tmp/omero-ms-zarr $git status
On branch master
Your branch is ahead of 'origin/master' by 12 commits.
  (use "git push" to publish your local commits)

Untracked files:
  (use "git add <file>..." to include in what will be committed)
    .zattrs
    .zgroup
    0/

Shouldn't these be in separate directories?

mtbc commented 4 years ago

From https://github.com/ome/omero-ms-zarr/blob/master/spec.md#basic-layout they look to me to be in the same directory.

mtbc commented 4 years ago

Using fetch-ms-zarr v0.1.2 locally,

$ find . -name '.z*' | sort
./0/.zarray
./1/.zarray
./2/.zarray
./3/.zarray
./4/.zarray
./5/.zarray
./.zattrs
./.zgroup
joshmoore commented 4 years ago

Sorry, I was being paranoid. Thanks.

mtbc commented 4 years ago

:+1: Best to be sure.