New feature: save cell-type-sepcific expression profiles

omnideconv / SimBu

Simulate pseudo-bulk RNAseq samples from scRNAseq expression data

http://omnideconv.org/SimBu/

GNU General Public License v3.0

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New feature: save cell-type-sepcific expression profiles #51

Open FFinotello opened 8 months ago

FFinotello commented 8 months ago

Hello @alex-d13!

I was thinking about one simple feature to be added to SimBu: the possibility of saving the expression profile of each cell type (simple pseudobulk per cell type, weighted by their correct mRNA scaling factor). This could be controlled by a dedicated argument (TRUE/FALSE).

How does this sound to you?

Francesca