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omorante / shinyepico

shinyÉPICo is a graphical and interactive pipeline to analyze Illumina DNA Methylation Arrays and to find Differentially Methylated CpGs
GNU Affero General Public License v3.0
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shiny-server instructions? #13

Closed rafalcode closed 2 years ago

rafalcode commented 2 years ago

What would be the way to get this to run on an already functioning shiny-server installation?

My guess is that a shiny-server installation would lke to see "ui.R" and "server.R" file, which could be shinyepicos "app_ui.R" and "app_server.R" files. I'm not sure if it's as easy as just renaming. I tried it, but got an error. However this may not be due to my renaming.

In any case, it would be good to have a paragraph about this. Cheers.

omorante commented 2 years ago

Hello and thanks for your comment.

As I explained in the README, I would recommend ShinyProxy + Docker instead of Shiny Server. However, I have just uploaded another branch (shiny_app) which is the adaptation with the updated code of shinyepico for use with Shiny Server. It includes an app.R file that can read the server.

I have done some minor changes to adapt the code for this usage. Please, let me know if it works for you!

rafalcode commented 2 years ago

Hi Octavio, Thanks very much for this, soon I will try it. I have not tried ShinyProxy yet, but I will look into it. Main reason is that my server is not very powerful, I don't want to have too many dockers on it, and it's also fully set up for serving shiny, that's all, wanted something native. Thanks so much. Cheers.