Add annotation columns using clinical annotator

oncokb / oncokb-annotator

Annotates variants in MAF with OncoKB annotation.

GNU Affero General Public License v3.0

122 stars 61 forks source link

Add annotation columns using clinical annotator #156

Closed zhx828 closed 2 years ago

zhx828 commented 2 years ago

[x] Add RESISTANCE_MUTATIONS
[x] Add #RESISTANCE_MUTATIONS
[x] Add #MUTATIONS_WITH_SENSITIVE_THERAPEUTIC_IMPLICATIONS
[x] Add #MUTATIONS_WITH_RESISTANCE_THERAPEUTIC_IMPLICATIONS

zhx828 commented 2 years ago

We have plan to no longer return Resistance as oncogenicity, but then we need to add a data attribute to indicate the mutation is found in the context of resistance.