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oncokb / oncokb-annotator

Annotates variants in MAF with OncoKB annotation.
GNU Affero General Public License v3.0
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Support additional SV headers && Test annotations for INTRAGENIC_DUPLICATION INTRAGENIC_LOSS #183

Closed zhx828 closed 2 years ago

zhx828 commented 2 years ago

INTRAGENIC_DUPLICATION INTRAGENIC_LOSS are used in the germline settings. We don't have to annotate them right now but map to UNKNOWN.

zhx828 commented 2 years ago

Additional headers were added in https://github.com/oncokb/oncokb-annotator/pull/184