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onecodex / finch-rs

A genomic minhashing implementation in Rust
https://www.onecodex.com
MIT License
93 stars 8 forks source link

Increase capnproto size #69

Open audy opened 10 months ago

audy commented 10 months ago

Capnproto was configured with a limit of ~8.5Gb which I am exceeding for large sketches. This PR doubles to limit to ~17Gb.

The error:

$ finch dist query.fa.sk assemblies.bsk

Error: capnproto error: Error { kind: Failed, description: "Message has 1178674811 words, which is too large. To increase the limit on the receiving end, see capnp::message::ReaderOptions." }

Caused by:
    Failed: Message has 1178674811 words, which is too large. To increase the limit on the receiving end, see capnp::message::ReaderOptions.