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ontodev / robot

ROBOT is an OBO Tool
http://robot.obolibrary.org
BSD 3-Clause "New" or "Revised" License
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Prefix map from OBO context not picked up? #839

Closed matentzn closed 2 years ago

matentzn commented 3 years ago

I am on ROBOT 1.9.0 snapshot:

When running ROBOT rename, the following prefixes do not get translated:

All of them are in the updated OBO context. Before the 1.9 release we should probably make sure these are picked up :)

matentzn commented 3 years ago

(all of these are new prefixes that changed during the 1.8 upgrade)

jamesaoverton commented 3 years ago

Updating the prefix maps is now part of the release process:

https://github.com/ontodev/robot/blob/master/util/release.sh#L101

Is any other action required?

matentzn commented 3 years ago

i mean: it has been updated, but ROBOT does not seem to be using it!

beckyjackson commented 3 years ago

These prefixes work in https://github.com/ontodev/robot/pull/837

My guess is it was trying to use obo_context.jsonld from obographs. I had to exclude this from the build to get rid of one of the warnings.

matentzn commented 3 years ago

Great thanks @beckyjackson