search

open-AIMS / ADRIA_matlab

Repository for the development of ADRIA: Adaptive Dynamic Reef Intervention Algorithms. ADRIA is a multi-criteria decision support tool set particularly useful for informing reef restoration and adaptation interventions.
1 stars 0 forks source link

Add 50% adjustment to bleaching #120

Closed ConnectedSystems closed 2 years ago

ConnectedSystems commented 2 years ago

As discussed over email, this PR adds the 50% adjustment to bleaching mortality.

ConnectedSystems commented 2 years ago

In addition to the small change here:

https://github.com/open-AIMS/ADRIA_repo/blob/7e4fb530cfa80e86061c3510908537e0c57d23a7/ADRIAfunctions/ADRIA_bleachingMortality.m#L52

fogging is being applied after the fact here:

https://github.com/open-AIMS/ADRIA_repo/blob/7e4fb530cfa80e86061c3510908537e0c57d23a7/ADRIAfunctions/coralScenario.m#L318

KRNA01 commented 2 years ago

Thanks @ConnectedSystems , this is consistent with what we discussed.

We should add reference to Baird et al 2018 (MEPS) as justification for the depth-adjustment of bleaching mortality.

Here's the DOI: https://doi.org/10.3354/meps12732

The fogging application is for now with reference to Mark Baird's (different Baird from the paper above) advice based on work in Daniel Harrison's group at Southern Cross Uni. We can update this later.

ConnectedSystems commented 2 years ago

We should add reference to Baird et al 2018 (MEPS) as justification for the depth-adjustment of bleaching mortality.

Note that I've already done this (see Ref 3 in the docstring)