Closed dbrnz closed 1 year ago
@tgbugs have you had a chance to look at this? I've had a look at the Python code but I don't have sufficient ApiNATOMY knowledge to understand what you are trying to do and the reason for the above error.
Dendrite lookup fails for:
ilxtr:neuron-type-bolew-unbranched-20
ilxtr:neuron-type-bolew-unbranched-19
ilxtr:neuron-type-bolew-unbranched-18
ilxtr:neuron-type-bolew-unbranched-17
ilxtr:neuron-type-bolew-unbranched-16
ilxtr:neuron-type-bolew-unbranched-23
ilxtr:neuron-type-bolew-unbranched-22
ilxtr:neuron-type-bolew-unbranched-21
ilxtr:neuron-type-bolew-unbranched-27
ilxtr:neuron-type-bolew-unbranched-26
ilxtr:neuron-type-bolew-unbranched-13
ilxtr:neuron-type-bolew-unbranched-29
ilxtr:neuron-type-bolew-unbranched-28
ilxtr:neuron-type-bolew-unbranched-25
ilxtr:neuron-type-bolew-unbranched-24
ilxtr:neuron-type-bolew-unbranched-15
ilxtr:neuron-type-bolew-unbranched-14
ilxtr:neuron-type-splen-1
and axon lookup fails for:
ilxtr:neuron-type-bolew-unbranched-2
ilxtr:neuron-type-sdcol-o
ilxtr:neuron-type-sdcol-f
@dbrnz https://github.com/AnatomicMaps/map-knowledge/pull/6 that should fix the issue.
Noting this here so that these terms will get removed from the connectivity extract, but they appear to be the cause of:
Meanwhile I'll do more checking on the Python side (in mapknowledge/apinatomy.py).